Articles

GENETIC VARIATION OF HUMPBACK GROUPER (Cromileptes altivelis) ON F1 AND F3 GENERATIONS Sembiring, Sari Budi Moria; Tridjoko, Tridjoko; Haryanti, Haryanti
Jurnal Ilmu dan Teknologi Kelautan Tropis Vol 5, No 1 (2013): Elektronik Jurnal Ilmu dan Teknologi Kelautan Tropis
Publisher : Jurnal Ilmu dan Teknologi Kelautan Tropis

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Abstract

Hatchery and culture technology of Humpback grouper has been developed. However,  sometimes it is still found constraint in sedd production and caused instability of production due to failure by many factors. Breeding program become necessary to provide seed with high quality and good genetic variation. Quantitative characteristic selection is one of breeding program to improve productivity in grouper aquaculture. The aim of this research was to produce good phenotyphic and genotypic quality of Humpback grouper candidate broodstock. Selection of Humpback grouper F1 and F3 was done based on quantitative characteristic (body length and weight) and genotyphic characteristic by using ramdom amplified polymorphism DNA (RAPD) method.  The results of conventional selection were found candidate broodstock of Humpback grouper F1 and F3 with body weight range from 170-210 g and 160-170 g consecutively.  Heterozygosity values of Humpback grouper analized by RAPD of F1 and F3 were 0.7940 and 0.7749 consecutively and it was not significantly different. This value emphasis that population of this F3 Humpback grouper was still good to grow for broodstock. Keywords: genetic variation, humpback grouper, F1, F3.
PERFORMANCE OF GONAD MATURATION AND SPAWNED OF GROUPER BROODSTOCK CROSS BREEDING BETWEEN F-2 AND F-0 Djoko, Tri; Haryanti, Haryanti; Moria, Sari Budi; Muzaki, A; Wardana, I K
Jurnal Ilmu dan Teknologi Kelautan Tropis Vol 6, No 1 (2014): Electronik Jurnal Ilmu dan Teknologi Kelautan Tropis
Publisher : Jurnal Ilmu dan Teknologi Kelautan Tropis

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Abstract

In fish grouper escpecially humpback grouper culture, seed and broodstock quality and availability determine the production success. Main supply of wild broodstock still dominates grouper hatchery activities, therefore, the exploitation of the wild broodstock is very high. Efforts to use the supply of cultured broodstock through selection and breeding processes will greatly determine their culture success. The purpose of this experiment was to get seeds from the cross breeding between F-2 and F-0. The research used two (2) concrete tanks with volume of 75 m3 each. Each tank was filled with 20  fishes consisting of 10 fishes of F-2 and 10 fishes of F-0. The experiment was conducted the Institute of Mariculture Research and Development, Gondol, Bali. The result showed a good gonadal development and natural spawning of cross breeding between F-2 and F-0. Total number of eggs (1.320.000) was found the highest in May in tank A, while the highest fertilized eggs of 385.000 were found in June.  The SSCP analyses showed no difference in genetic characters of broodstock from cross-breeding between the female parent F-2 and F-0 male parent. Keywords: Humpback Grouper, gonad, spawned, cross breeding, larvae
GENETIC VARIATION OF HUMPBACK GROUPER (Cromileptes altivelis) ON F1 AND F3 GENERATIONS Sembiring, Sari Budi Moria; Tridjoko, Tridjoko; Haryanti, Haryanti
Jurnal Ilmu dan Teknologi Kelautan Tropis Vol 5, No 1 (2013): Elektronik Jurnal Ilmu dan Teknologi Kelautan Tropis
Publisher : Bogor Agricultural University

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Abstract

Hatchery and culture technology of Humpback grouper has been developed. However,  sometimes it is still found constraint in sedd production and caused instability of production due to failure by many factors. Breeding program become necessary to provide seed with high quality and good genetic variation. Quantitative characteristic selection is one of breeding program to improve productivity in grouper aquaculture. The aim of this research was to produce good phenotyphic and genotypic quality of Humpback grouper candidate broodstock. Selection of Humpback grouper F1 and F3 was done based on quantitative characteristic (body length and weight) and genotyphic characteristic by using ramdom amplified polymorphism DNA (RAPD) method.  The results of conventional selection were found candidate broodstock of Humpback grouper F1 and F3 with body weight range from 170-210 g and 160-170 g consecutively.  Heterozygosity values of Humpback grouper analized by RAPD of F1 and F3 were 0.7940 and 0.7749 consecutively and it was not significantly different. This value emphasis that population of this F3 Humpback grouper was still good to grow for broodstock. Keywords: genetic variation, humpback grouper, F1, F3.
PERFORMANCE OF GONAD MATURATION AND SPAWNED OF GROUPER BROODSTOCK CROSS BREEDING BETWEEN F-2 AND F-0 Djoko, Tri; Haryanti, Haryanti; Moria, Sari Budi; Muzaki, A; Wardana, I K
Jurnal Ilmu dan Teknologi Kelautan Tropis Vol 6, No 1 (2014): Electronik Jurnal Ilmu dan Teknologi Kelautan Tropis
Publisher : Bogor Agricultural University

Show Abstract | Original Source | Check in Google Scholar | Full PDF (446.175 KB)

Abstract

In fish grouper escpecially humpback grouper culture, seed and broodstock quality and availability determine the production success. Main supply of wild broodstock still dominates grouper hatchery activities, therefore, the exploitation of the wild broodstock is very high. Efforts to use the supply of cultured broodstock through selection and breeding processes will greatly determine their culture success. The purpose of this experiment was to get seeds from the cross breeding between F-2 and F-0. The research used two (2) concrete tanks with volume of 75 m3 each. Each tank was filled with 20  fishes consisting of 10 fishes of F-2 and 10 fishes of F-0. The experiment was conducted the Institute of Mariculture Research and Development, Gondol, Bali. The result showed a good gonadal development and natural spawning of cross breeding between F-2 and F-0. Total number of eggs (1.320.000) was found the highest in May in tank A, while the highest fertilized eggs of 385.000 were found in June.  The SSCP analyses showed no difference in genetic characters of broodstock from cross-breeding between the female parent F-2 and F-0 male parent. Keywords: Humpback Grouper, gonad, spawned, cross breeding, larvae
Biochemical Genetic Analysis Of Three Population Of Marble Grouper, Epinephelus polypekhadion Permana, Gusti Ngurah; Haryanti, Haryanti; Moria, Sari Budi; Giri, Nyoman Adiasmara; Sugama, Ketut
Jurnal Perikanan Universitas Gadjah Mada Vol 9, No 2 (2007)
Publisher : Universitas Gadjah Mada

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Abstract

Genetic variations of marble groupers, Epinephelus polypekhadion were evaluated to know genetic performance of fish to support fish seed production. Fifty fish samples from three locations i.e. West Nusa Tenggara, South Sulawesi and East Java were collected for analysis. Genetic analysis has been examined through allozyme electrophoresis by using 11 enzymes (ADH, GPI, SDH, IDH, LDH, ME, PGM, 6PGD, MPI, SP, EST). The result showed that 16 loci were detected, and three of them were polymorphism enzymes namely Isocitric dehydrogenase (IDH*), Glucose Phosphate Isomerase (GPI-1*) and Esterase (EST-2*). One locus (EST-2) was polymorphic in the East Java and West Nusa Tenggara populations and three loci (EST-2, GPI-1 and IDH) were polymorphic in the South Sulawesi population. The heterozygosity ranged from 0.007 to 0.034. Rogers genetic distance between population pairs were ranged from 0.005 to 0.012 (average = 0.009). Differences between genetic populations were significant (P<0.05). East Java and West Nusa Tenggara populations have same gene pool.
Polimorfisme Enzim Glucose-6-Phosphate Isomerase pada Tiga Populasi Tuna Sirip Kuning (Thunnus albacares) Permana, Gusti Ngurah; Hutapea, Jhon H.; Moria, Sari Budi; Haryanti, Haryanti
Jurnal Perikanan Universitas Gadjah Mada Vol 8, No 1 (2006)
Publisher : Universitas Gadjah Mada

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Abstract

Samples of yellowfin tuna (Thunnus albacares) were taken from three locations Bali, North Sulawesi and North Maluku. The glucose-6-phosphate isomerase (GPI) was analyzed from liver using allozyme electrophoresis method. Polymorphism of GPI enzyme was observed and four alleles (A, B ,C, D) were found in Bali population, three alleles (A,B,C) were found in North Maluku and North Sulawesi populations. Heterozygosity values, from Bali, North Maluku and North Sulawesi were 0.419; 0.417; 0.143 respectively. Genetic distance between North Sulawesi and North Maluku were 0.029, and with Bali population was 0.353. These results indicated that North Maluku and North Sulawesi population were not separate by geographic barrier, therefore genetic distance of both populations was closed. However, those populations were genetically separated to the Bali population might be due to major hydrological barrier.
GENETIC IDENTIFICATION FOR TUNA AND RAINBOW RUNNER CAPTURE IN NORTH BALI WATERS Permana, Gusti Ngurah; Hutapea, Jhon Harianto; Haryanti, Haryanti; Sembiring, Sari Budi Moria; Nakazawa, Akio
Indonesian Aquaculture Journal Vol 1, No 1 (2006): (June 2006)
Publisher : Pusat Penelitian dan Pengembangan Perikanan, Badan Penelitian dan Pengembangan Kelautan da

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Abstract

Gondol Research Institute for Mariculture identification of tuna and rainbow runner was an objective in this current study. Samples of five species were collected from territorial water of North Bali. The method used in this study was allozyme electrophoresis. The results showed that buffer of CAPM-6 (citric acid aminoprophylmorpholine) resulted in a sharp and clear banding pattern. The species could be differentiated in six diagnostic isozyme patterns Idh* (isocitrate dehydrogenase), 6Pgd* (6 phosphogluconate dehydrogenase), Gpi* (glucose phosphate isomerase), Mdh* (malate dehydrogenase), Est* (esterase), and Sp* (sarcoplasmic protein). All species were in Hardy-weinberg equilibrium. Heterozygosities of species were ranged from 0.00 to 0.099. Yellowfin tuna has the highest heterozigosity compared with the other species. Clustering samples according to pairs revealed that genetic distance of Bullet tuna (A. rochei) and Eastern little tuna (E. affinis) had small value (0.001). By contrast, the largest value was observed between yellowfin tuna, T. albacares and rainbow runner, E. bipunnulata (0.007). This value indicated that Bullet tuna (A. rochei) and Eastern little tuna (E. affinis) closed relation, while among yellowfin tuna, skipjack tuna, and rainbow runner, were separated phylogenically.
EFFECTIVITY OF INACTIVE GSDIV (GROUPER SLEEPY DISEASE IRIDOVIRUS) VACCINE IN GROUPER FISH (Cromileptes altivelis and Epinephelus fuscoguttatus) AGAINST GSDIV INFECTION Mahardika, Ketut; Mastuti, Indah; Haryanti, Haryanti
Indonesian Aquaculture Journal Vol 8, No 2 (2013): (December 2013)
Publisher : Pusat Penelitian dan Pengembangan Perikanan, Badan Penelitian dan Pengembangan Kelautan da

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Abstract

Grouper sleepy disease iridovirus (GSDIV) has been known as viral agent causing mass mortality and significant economic losses in Indonesian aquaculture industry. The aim of this research was to know the effectivity of formalin-inactivated GSDIV vaccine to prevent GSDIV infection in humpback grouper (Cromileptes altivelis) and tiger grouper (Epinephelus fuscoguttatus). The vaccine was derived from GF cells infected-GSDIV which activated using formalin. Used vaccine was contained titer virus of 102,80-105,80 TCID50/ mL. Result of vaccination test indicated that a vaccinated grouper fish with formalininactive GSDIV vaccine should decreased mortality rate of 5%–85.4% in humpback grouper and tiger grouper that infected with GSDIV. Histopathologically, infected fish from vaccinated and control groups showed formation of enlarged cells as well as necrotized cells especially in spleen and kidney tissues. On the other hand, surviving fish from both vaccinated and control groups did not contained formation of enlarged cells in spleen, kidney, liver, and stomach.
PHENOTYPIC AND GENOTYPIC PERFORMANCES OF BLACK TIGER SHRIMP, Penaeus monodon HAVING FAST GROWTH TRAITS Haryanti, Haryanti; Muzaki, Ahmad; Wardana, Ida Komang; Fachrudin, Fachrudin; Sembiring, Sari Budi Moria; Permana, I Gusti Ngurah
Indonesian Aquaculture Journal Vol 4, No 2 (2009): (December 2009)
Publisher : Pusat Penelitian dan Pengembangan Perikanan, Badan Penelitian dan Pengembangan Kelautan da

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Abstract

Shrimp breeding research focusing on fast growth traits is important to develop better phenotypic and genotypic characters of shrimp spawners. The aim of this research was to evaluate shrimp breeding technology to produce fry having fast growth traits. Selection was initiated from the breeding of wild shrimp spawners (F-0) based on full sib mating, probiotics, biosecurity, and viral diseases diagnosis. Viral disease diagnoses were performed using 7 viruses (TSV, WSSV, IHHNV, YHV, BP, MBV, and HPV) provided in the IQ-2000 kit. The result showed that 11 families of the first generation (F-1) shrimp were phenotypically varied (big, regular and small size). Number of fry from the first generation resulted from phenotypic selection that have fast growth trait ranged between 1.99% and 4.49% of the total fry population. Genotypic performance of the shrimp broodstock (F-0) and the first generation (F-1) showed different genetic variations. Heterozigosity values were 0.2872±0.0047 (female) and 0.5487±0.0103 (male) for shrimp broodstock (F-0), 0.704±0.0261 for the first generation (F-1) having fast growth trait, and 0.6224±0.023 for F-1 having slow growth. Gene markers of fast growth trait were indicated by the genes with molecular weights of 1,025; 1,280; and 1,325 basepairs and having different DNA sequences compared to that of slow growth shrimp.
KARAKTER GENETIK INDUK (F-0) DAN TURUNANNYA (F-1) PADA IKAN HIAS LAUT CLOWN (Amphiprion percula) MENGGUNAKAN MARKER RAPD (Random Amplified Polymorfism DNA) Sembiring, Sari Budi Moria; Setiawati, Ketut Maha; Haryanti, Haryanti; Wardana, Ida Komang
Jurnal Riset Akuakultur Vol 5, No 2 (2010): (Agustus 2010)
Publisher : Pusat Riset Perikanan, Badan Riset dan Sumber Daya Manusia Kelautan dan Perikanan

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Abstract

Studi analisis karakter genetik ikan hias laut clown menggunakan metode penanda DNA RAPD dilakukan dalam upaya membantu pengembangan perbenihan dan budidaya ikan hias laut clown di Indonesia. Tujuan penelitian ini adalah untuk mendeterminasi karakter genetik dengan menggunakan analisis individu dari populasi induk (F-0) dan turunannya (F-1) sehingga diperoleh tingkat penurunan keragaman genetik dan keterkaitannya dengan karakter morfologi. Sampel yang dianalisis terdiri atas 5 pasang induk ikan clown (10 sampel) dan masing-masing turunannya sebanyak 10 ekor (50 sampel) sehingga total 60 sampel. Nilai rata-rata keragaman genetik induk ikan clown dari semua lokus primer sebesar 0,253, sedangkan pada turunannya (F-1) adalah 0,157. Hal ini menggambarkan adanya pengaruh genetik terhadap perbedaan pola pemunculan band putih.Study genetic characteristic of clownfish, Amphiprion percula using RAPD DNA marker was conducted in order to support development of breeding and culture program of marine ornamental clownfish in Indonesia. The objective of this research was to determine of genetic characteristic of clown fish using individual analysis from F-0 population and its generations (F-1) to find specific marker which is related to its morphology. Total samples analyzed were 60, consist of 5 pairs of clownfish broodstock (10 samples) and 10 ind each generations (50 samples). Mean value of genetic diversity of clown fish broodstock from all primer loci was 0.253, while on its generation F-1 was 0.157. This result showed there was effect of genetic on the differences of white band pattern appearance.